Assay name
HS_TPM1_1669049 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for TPM1
Assay targets 27 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 27 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
TPM1
Gene aliases
C15orf13;CMH3
Species
Homo sapiens
Main target
ENST00000558910
Exons numbers
3-4
Ensembl exons ids
ENSE00003586543;ENSE00003506327
Amplicon start
405
Amplicon length
96
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000267996
Protein coding
CCDS32262
NM_001018007
Chr.15: 63042758 - 63071915
ENST00000288398
Protein coding
CCDS10181
NM_000366
Chr.15: 63042632 - 63066093
ENST00000317516
Protein coding
CCDS81891
NM_001330351
Chr.15: 63048489 - 63070278
ENST00000334895
Protein coding
CCDS32264
NM_001301289;NM_001018008
Chr.15: 63048439 - 63070632
ENST00000357980
Protein coding
NM_001365778
Chr.15: 63042751 - 63071912
ENST00000358278
Protein coding
CCDS32263
NM_001018006
Chr.15: 63042685 - 63071889
ENST00000403994
Protein coding
CCDS45273
NM_001018005
Chr.15: 63042747 - 63066178
ENST00000404484
Protein coding
CCDS81892
NM_001330344
Chr.15: 63048471 - 63071263
ENST00000558264
Retained intron
Chr.15: 63055729 - 63071912
ENST00000558314
Retained intron
Chr.15: 63042751 - 63061265
ENST00000558544
Nonsense mediated decay
Chr.15: 63048500 - 63071882
ENST00000558868
Retained intron
Chr.15: 63048537 - 63061098
ENST00000558910
Protein coding
Chr.15: 63048487 - 63065278
ENST00000559281
Protein coding
CCDS81894
NM_001330346
Chr.15: 63048576 - 63066093
ENST00000559397
Protein coding
CCDS58368
NM_001018020
Chr.15: 63042770 - 63071190
ENST00000559831
Nonsense mediated decay
Chr.15: 63044141 - 63062598
ENST00000560615
Protein coding
Chr.15: 63048813 - 63062277
ENST00000560959
Protein coding
Chr.15: 63048562 - 63062892
ENST00000560970
Protein coding
Chr.15: 63042830 - 63066093
ENST00000560975
Retained intron
Chr.15: 63042684 - 63071323
ENST00000561266
Protein coding
CCDS86459
NM_001301244
Chr.15: 63042777 - 63066091
ENST00000644204
Retained intron
Chr.15: 63043967 - 63071779
ENST00000651344
Retained intron
Chr.15: 63042648 - 63071897
ENST00000651577
Protein coding
Chr.15: 63048826 - 63070560
ENST00000651590
Nonsense mediated decay
Chr.15: 63048493 - 63070314
ENST00000651704
Protein coding
Chr.15: 63048169 - 63071021