Assay name
HS_ATG16L1_1798869 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for ATG16L1
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
ATG16L1
Species
Homo sapiens
Main target
ENST00000626639
Exons numbers
10-11
Ensembl exons ids
ENSE00003762409;ENSE00003774849
Amplicon start
1061
Amplicon length
71
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000625501
Protein coding
NM_001190267;NM_001190266
Chr.CHR_HG2232_PATCH: 233251673 - 233295669
ENST00000625558
Retained intron
Chr.CHR_HG2232_PATCH: 233274304 - 233281114
ENST00000626189
Retained intron
Chr.CHR_HG2232_PATCH: 233251682 - 233295666
ENST00000626264
Processed transcript
Chr.CHR_HG2232_PATCH: 233265955 - 233289883
ENST00000626623
Protein coding
NM_198890
Chr.CHR_HG2232_PATCH: 233251571 - 233295673
ENST00000626639
Protein coding
NM_001363742
Chr.CHR_HG2232_PATCH: 233251714 - 233295674
ENST00000629673
Protein coding
Chr.CHR_HG2232_PATCH: 233251676 - 233277594
ENST00000629755
Retained intron
Chr.CHR_HG2232_PATCH: 233251701 - 233295666
ENST00000630066
Protein coding
NM_017974
Chr.CHR_HG2232_PATCH: 233251706 - 233295674
ENST00000630204
Protein coding
Chr.CHR_HG2232_PATCH: 233251672 - 233295674
ENST00000631068
Nonsense mediated decay
Chr.CHR_HG2232_PATCH: 233251673 - 233295674