Assay name
HS_PTPN22_1812838 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for PTPN22
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
PTPN22
Gene aliases
Lyp;Lyp1;Lyp2;PTPN8
Species
Homo sapiens
Main target
ENST00000460620
Exons numbers
1-2
Ensembl exons ids
ENSE00003524708;ENSE00003519064
Amplicon start
110
Amplicon length
126
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000359785
Protein coding
CCDS863
NM_001193431;NM_015967
Chr.1: 113813811 - 113871712
ENST00000420377
Protein coding
Chr.1: 113819299 - 113871712
ENST00000460620
Protein coding
Chr.1: 113813811 - 113871712
ENST00000484147
Retained intron
Chr.1: 113832947 - 113871664
ENST00000525799
Protein coding
Chr.1: 113819526 - 113871712
ENST00000528414
Protein coding
CCDS864
NM_012411
Chr.1: 113813815 - 113871698
ENST00000529045
Nonsense mediated decay
Chr.1: 113859063 - 113871753
ENST00000532224
Nonsense mediated decay
Chr.1: 113814679 - 113871708
ENST00000534519
Processed transcript
Chr.1: 113856783 - 113871736
ENST00000538253
Protein coding
CCDS76191
NM_001308297
Chr.1: 113813812 - 113871753