Assay name
HS_TSC2_1824817 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for TSC2
Assay targets 31 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 31 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
TSC2
Gene aliases
tuberin;LAM;PPP1R160;TSC4
Species
Homo sapiens
Main target
ENST00000644399
Exons numbers
4-5
Ensembl exons ids
ENSE00003516607;ENSE00000873731
Amplicon start
453
Amplicon length
118
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000219476
Protein coding
CCDS10458
NM_000548
Chr.16: 2047985 - 2089491
ENST00000350773
Protein coding
CCDS45384
NM_001114382
Chr.16: 2048020 - 2088718
ENST00000382538
Protein coding
CCDS81934
NM_001318829
Chr.16: 2047980 - 2088700
ENST00000432909
Protein coding
Chr.16: 2053433 - 2056230
ENST00000439673
Protein coding
CCDS81933
NM_001318827
Chr.16: 2048014 - 2088701
ENST00000568454
Protein coding
CCDS81932
NM_001318832
Chr.16: 2048202 - 2088715
ENST00000568692
Retained intron
Chr.16: 2048736 - 2055892
ENST00000642561
Protein coding
Chr.16: 2048043 - 2088671
ENST00000642797
Protein coding
Chr.16: 2048041 - 2088718
ENST00000642812
Retained intron
Chr.16: 2048038 - 2065103
ENST00000642936
Protein coding
NM_021055;NM_001318831
Chr.16: 2047986 - 2088716
ENST00000643088
Protein coding
NM_001363528
Chr.16: 2047977 - 2089245
ENST00000643120
Retained intron
Chr.16: 2053919 - 2055688
ENST00000643149
Retained intron
Chr.16: 2047985 - 2064935
ENST00000643298
Nonsense mediated decay
Chr.16: 2048012 - 2076092
ENST00000643745
Nonsense mediated decay
Chr.16: 2047985 - 2065219
ENST00000643946
Protein coding
Chr.16: 2047977 - 2089487
ENST00000644043
Protein coding
CCDS10459
Chr.16: 2048041 - 2088718
ENST00000644135
Nonsense mediated decay
Chr.16: 2047983 - 2071616
ENST00000644222
Retained intron
Chr.16: 2048008 - 2065174
ENST00000644329
Protein coding
Chr.16: 2048033 - 2088691
ENST00000644335
Protein coding
Chr.16: 2047995 - 2088723
ENST00000644399
Protein coding
Chr.16: 2048623 - 2088710
ENST00000644417
Nonsense mediated decay
Chr.16: 2053402 - 2056733
ENST00000644665
Retained intron
Chr.16: 2047978 - 2065258
ENST00000645591
Retained intron
Chr.16: 2047967 - 2065258
ENST00000646388
Protein coding
Chr.16: 2048009 - 2088720
ENST00000646823
Retained intron
Chr.16: 2053572 - 2060816
ENST00000647234
Retained intron
Chr.16: 2048741 - 2065298
ENST00000647242
Retained intron
Chr.16: 2050437 - 2064941