Assay name
HS_ERCC8_1831309 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for ERCC8
Best transcript assay for ENST00000643708
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000643708
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
ERCC8
Gene aliases
CSA;CKN1
Species
Homo sapiens
Main target
ENST00000643708
Exons numbers
3-4
Ensembl exons ids
ENSE00003545609;ENSE00003513480
Amplicon start
293
Amplicon length
88
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000265038
Protein coding
CCDS3978
NM_001290285;NM_000082;NM_001007233
Chr.5: 60873832 - 60945051
ENST00000381118
Nonsense mediated decay
Chr.5: 60873831 - 60945051
ENST00000439176
Protein coding
Chr.5: 60902482 - 60945073
ENST00000477893
Retained intron
Chr.5: 60917963 - 60945059
ENST00000497892
Retained intron
Chr.5: 60903360 - 60945051
ENST00000643034
Nonsense mediated decay
Chr.5: 60873833 - 60945064
ENST00000643708
Nonsense mediated decay
Chr.5: 60873879 - 60945051
ENST00000647431
Nonsense mediated decay
Chr.5: 60873835 - 60944959
ENST00000647486
Nonsense mediated decay
NM_001007234
Chr.5: 60890911 - 60944959