Assay name
HS_CHRD_1855254 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for CHRD
Best transcript assay for ENST00000204604
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000204604
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
CHRD
Species
Homo sapiens
Main target
ENST00000204604
Exons numbers
18-19
Ensembl exons ids
ENSE00003657362;ENSE00003618009
Amplicon start
2543
Amplicon length
61
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000204604
Protein coding
CCDS3266
NM_001304473;NM_003741;NM_001304474
Chr.3: 184380073 - 184389829
ENST00000348986
Protein coding
Chr.3: 184380319 - 184389829
ENST00000420973
Nonsense mediated decay
Chr.3: 184380073 - 184389829
ENST00000448472
Nonsense mediated decay
Chr.3: 184380073 - 184389829
ENST00000450923
Protein coding
CCDS77868
NM_001304472
Chr.3: 184380207 - 184389829
ENST00000460627
Retained intron
Chr.3: 184380073 - 184389829
ENST00000464833
Retained intron
Chr.3: 184384788 - 184387401