Assay name
HS_RUNX2_1906972 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for RUNX2
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
RUNX2
Gene aliases
AML3;PEBP2A1;PEBP2aA1;CCD;CBFA1;CCD1
Species
Homo sapiens
Main target
ENST00000465038
Exons numbers
4-5
Ensembl exons ids
ENSE00003506726;ENSE00003586560
Amplicon start
738
Amplicon length
65
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000359524
Protein coding
Chr.6: 45422485 - 45551079
ENST00000371432
Protein coding
CCDS43468
NM_001015051
Chr.6: 45328317 - 45551082
ENST00000371436
Protein coding
CCDS43468
Chr.6: 45328727 - 45547393
ENST00000371438
Protein coding
CCDS43467
Chr.6: 45328369 - 45551079
ENST00000465038
Protein coding
CCDS43467
Chr.6: 45328323 - 45547305
ENST00000478660
Nonsense mediated decay
Chr.6: 45422036 - 45663872
ENST00000483377
Nonsense mediated decay
Chr.6: 45328157 - 45547209
ENST00000576263
Protein coding
Chr.6: 45328727 - 45664349
ENST00000625924
Protein coding
CCDS64443
NM_001278478
Chr.6: 45422577 - 45547305
ENST00000646519
Nonsense mediated decay
Chr.6: 45422099 - 45550976
ENST00000647337
Protein coding
CCDS43467
NM_001024630
Chr.6: 45328330 - 45551082