Assay name
HS_SHANK2_1912756 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SHANK2
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
SHANK2
Gene aliases
CTTNBP1;ProSAP1;SHANK;SPANK-3;CORTBP1
Species
Homo sapiens
Main target
ENST00000412252
Exons numbers
1-2
Ensembl exons ids
ENSE00001695403;ENSE00001784734
Amplicon start
86
Amplicon length
103
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000338508
Protein coding
CCDS76448
NM_133266
Chr.11: 70469435 - 70661818
ENST00000357171
Protein coding
Chr.11: 70472819 - 70661762
ENST00000409161
Protein coding
Chr.11: 70467856 - 70662197
ENST00000409530
Protein coding
Chr.11: 70489013 - 70661840
ENST00000412252
Protein coding
Chr.11: 70472819 - 70661762
ENST00000426687
Protein coding
Chr.11: 70492432 - 70698769
ENST00000449116
Protein coding
Chr.11: 70490167 - 70661840
ENST00000449833
Protein coding
Chr.11: 70467856 - 70661818
ENST00000470759
Processed transcript
Chr.11: 70654146 - 70807074
ENST00000601538
Protein coding
NM_012309
Chr.11: 70469435 - 71224762