Assay name
HS_ATP5F1A_2474589 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR and dPCR wet-lab validated
Assay specification
Best coverage assay for ATP5F1A
Best transcript assay for ENST00000590665
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Best transcript assay for ENST00000590665
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Gene symbol
ATP5F1A
Gene aliases
ATP5A;hATP1;OMR;ORM;ATP5AL2;ATPM;ATP5A1
Species
Homo sapiens
Main target
ENST00000590665
Exons numbers
3-4
Ensembl exons ids
ENSE00003684250;ENSE00003678882
Amplicon start
323
Amplicon length
116
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000282050
Protein coding
CCDS11927
NM_001001937
Chr.18: 46084144 - 46104233
ENST00000398752
Protein coding
CCDS11927
NM_004046
Chr.18: 46080248 - 46098296
ENST00000586592
Nonsense mediated decay
Chr.18: 46084150 - 46098315
ENST00000589611
Retained intron
Chr.18: 46089429 - 46092198
ENST00000589869
Protein coding
Chr.18: 46088136 - 46104334
ENST00000590156
Nonsense mediated decay
Chr.18: 46084150 - 46098295
ENST00000590324
Protein coding
Chr.18: 46089632 - 46104233
ENST00000590406
Protein coding
Chr.18: 46089599 - 46104227
ENST00000590448
Retained intron
Chr.18: 46089759 - 46104253
ENST00000590665
Protein coding
CCDS59315
NM_001257334
Chr.18: 46084150 - 46098296
ENST00000591981
Nonsense mediated decay
Chr.18: 46089822 - 46098296
ENST00000592989
Protein coding
Chr.18: 46089822 - 46104273
ENST00000593152
Protein coding
CCDS58620
NM_001001935;NM_001257335
Chr.18: 46084144 - 46098353