Assay name
HS_ATRX_2474600 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for ATRX
Best transcript assay for ENST00000373344
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000373344
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
ATRX
Gene aliases
XH2;XNP;RAD54;JMS;MRX52
Species
Homo sapiens
Main target
ENST00000373344
Exons numbers
17-18
Ensembl exons ids
ENSE00003589340;ENSE00003485723
Amplicon start
4938
Amplicon length
127
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000373344
Protein coding
CCDS14434
NM_000489
Chr.X: 77504878 - 77786216
ENST00000395603
Protein coding
CCDS14435
NM_138270
Chr.X: 77505713 - 77786216
ENST00000480283
Nonsense mediated decay
Chr.X: 77505713 - 77786216
ENST00000623242
Nonsense mediated decay
Chr.X: 77633353 - 77652276