Assay name
HS_CCS_2474680 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for CCS
Best transcript assay for ENST00000310190
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000310190
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
CCS
Species
Homo sapiens
Main target
ENST00000310190
Exons numbers
2-3
Ensembl exons ids
ENSE00002197662;ENSE00001188303
Amplicon start
113
Amplicon length
92
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000310190
Protein coding
Chr.11: 66593241 - 66605919
ENST00000526066
Retained intron
Chr.11: 66593190 - 66599803
ENST00000530384
Retained intron
Chr.11: 66593153 - 66605912
ENST00000530961
Nonsense mediated decay
Chr.11: 66593201 - 66605998
ENST00000531990
Retained intron
Chr.11: 66593233 - 66605298
ENST00000533244
Protein coding
CCDS8146
NM_005125
Chr.11: 66593185 - 66606019