Assay name
HS_HERPUD1_2474877 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for HERPUD1
Best transcript assay for ENST00000563343
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000563343
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
HERPUD1
Gene aliases
KIAA0025;Mif1;HERP;SUP
Species
Homo sapiens
Main target
ENST00000563343
Exons numbers
3-4
Ensembl exons ids
ENSE00003494366;ENSE00003684299
Amplicon start
214
Amplicon length
120
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000300302
Protein coding
CCDS45492
NM_001010989
Chr.16: 56932147 - 56943881
ENST00000344114
Protein coding
Chr.16: 56932147 - 56943881
ENST00000439977
Protein coding
CCDS10771
NM_001272103;NM_014685
Chr.16: 56932142 - 56944864
ENST00000563343
Protein coding
Chr.16: 56933208 - 56939946
ENST00000563781
Processed transcript
Chr.16: 56935378 - 56942202
ENST00000565966
Nonsense mediated decay
Chr.16: 56932147 - 56940047
ENST00000568358
Protein coding
Chr.16: 56935402 - 56943548
ENST00000569569
Retained intron
Chr.16: 56932147 - 56937413
ENST00000570273
Processed transcript
Chr.16: 56932148 - 56943599