Assay name
HS_PMS2_2475141 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for PMS2
Best transcript assay for ENST00000642456
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000642456
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
PMS2
Gene aliases
H_DJ0042M02.9;HNPCC4;MLH4;PMS-2;PMSL2
Species
Homo sapiens
Main target
ENST00000642456
Exons numbers
7-8
Ensembl exons ids
ENSE00003739851;ENSE00003734436
Amplicon start
814
Amplicon length
99
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000265849
Protein coding
CCDS5343
NM_001322006;NM_001322014;NM_000535
Chr.7: 5970925 - 6009049
ENST00000406569
Processed transcript
Chr.7: 5977674 - 6009019
ENST00000441476
Protein coding
CCDS83155
NM_001322008;NM_001322007
Chr.7: 5973242 - 6009106
ENST00000642292
Protein coding
CCDS87474
NM_001322010;NM_001322004
Chr.7: 5973247 - 6009097
ENST00000642456
Protein coding
CCDS87474
NM_001322013;NM_001322012;NM_001322003;NM_001322015;NM_001322011;NM_001322009;NM_001322005
Chr.7: 5973274 - 6009075
ENST00000643595
Nonsense mediated decay
Chr.7: 5973361 - 6009041
ENST00000644110
Protein coding
CCDS83155
Chr.7: 5973399 - 6004006