Assay name​
MM_IRF1_2336060 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for Irf1
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
Irf1
Species​
Mus musculus
Main target​
ENSMUST00000140866
Exons numbers​
4-5
Ensembl exons ids​
ENSMUSE00001231881;ENSMUSE00001279908
Amplicon start​
504
Amplicon length​
111
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000019043
Protein coding
CCDS24686
NM_001159396
Chr.11: 53770495 - 53777323
ENSMUST00000108920
Protein coding
CCDS24686
NM_008390
Chr.11: 53770014 - 53777323
ENSMUST00000108922
Protein coding
CCDS48796
NM_001159393
Chr.11: 53770051 - 53778374
ENSMUST00000123376
Protein coding
Chr.11: 53770487 - 53774194
ENSMUST00000128336
Processed transcript
Chr.11: 53770071 - 53776378
ENSMUST00000133291
Protein coding
Chr.11: 53770509 - 53773957
ENSMUST00000140866
Protein coding
Chr.11: 53770048 - 53775103
ENSMUST00000142221
Nonsense mediated decay
Chr.11: 53770105 - 53774085
ENSMUST00000153054
Retained intron
Chr.11: 53773153 - 53774130