APC

APC Gene Summary

This gene encodes a tumor suppressor protein that acts as an antagonist of the Wnt signaling pathway. It is also involved in other processes including cell migration and adhesion, transcriptional activation, and apoptosis. Defects in this gene cause familial adenomatous polyposis (FAP), an autosomal dominant pre-malignant disease that usually progresses to malignancy. Mutations in the APC gene have been found to occur in most colorectal cancers, where disease-associated mutations tend to be clustered in a small region designated the mutation cluster region (MCR) and result in a truncated protein product. [provided by RefSeq, Jun 2022]

Details

Type
Protein Coding
Official Symbol
APC
Official Name
APC regulator of WNT signaling pathway [Source:HGNC Symbol;Acc:HGNC:583]
Ensembl ID
ENSG00000134982
Bio databases IDs NCBI: 324 Ensembl: ENSG00000134982
Aliases APC regulator of WNT signaling pathway, protein phosphatase 1, regulatory subunit 46
Synonyms
APC1,Apc7,APC (PROC),APC regulator of WNT signaling pathway,APC, WNT signaling pathway regulator,BTPS2,CC1,DESMD,DP2,DP2.5,DP3,Familial adenomatous polyposis,GS,mAPC,Min,PPP1R46,RATAPC
Species
Human, homo_sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Adenomatous polyposis coli tumour suppressor protein
  • Beta catenin regulatory domain
  • Armadillo/beta-catenin-like repeat
  • Unstructured region on APC between 1st two creatine-rich regions
  • Unstructured region on APC between APC_crr regions 5 and 6
  • Unstructured region on APC between 1st and 2nd catenin-bdg motifs
  • protein kinase regulator
  • enzyme
  • identical protein binding
  • EB-binding domain
  • PIP-like box
  • Samp motif
  • Armadillo-associated region on APC
  • APC repeat
  • basic domain
  • Cell division protein ZapB
  • EB-1 Binding Domain
  • armadillo repeat domain
  • beta-catenin binding domain
  • ubiquitin protein ligase binding
  • microtubule binding domain
  • Axin binding domain
  • protein kinase binding
  • nuclear export signal
  • protease binding
  • beta-catenin binding
  • nuclear localization sequence
  • Unstructured region on APC between SAMP and APC_crr
  • Coiled-coil N-terminus of APC, dimerization domain
  • APC basic domain
  • protein binding
  • Apc 20 amino acid repeat
  • microtubule binding
  • binding protein
  • Adenomatous polyposis coli (APC) repeat
  • gamma-catenin binding
  • Armadillo/beta-catenin-like repeats
  • Unstructured region on APC between APC_crr and SAMP
  • Eb1 binding domain
  • microtubule plus-end binding
  • catenin binding domain
  • PDZ binding motif
  • NTR domain
  • Apc 15-amino acid repeat

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • SLC6A4
  • NR3C1
  • APC
  • ESR1
  • FGFR4
  • MCM3AP
  • IQGAP1
  • MAPRE1
  • SPECC1L
  • SYNE3
disease
  • cancer
  • neoplasia
  • familial colorectal cancer
  • adenoma formation
  • gastrointestinal neoplasia
  • benign neoplasia
  • epithelial neoplasia
  • prostate cancer
  • hepatocellular carcinoma
  • attenuated familial adenomatous polyposis type 1
regulated by
  • ethanol
  • lipopolysaccharide
  • FGF2
  • SOX2
  • hydrogen peroxide
  • CTNNB1
  • methylnitronitrosoguanidine
  • beta-estradiol
  • AXIN2
  • HRAS
regulates
  • ERK1/2
  • CASP3
  • NRG1
  • AKT
  • TP53
  • TNF
  • CTNNB1
  • PPARA
  • IL1B
  • JUN
role in cell
  • apoptosis
  • dephosphorylation in
  • serine phosphorylation in
  • activation in
  • quantity
  • cell death
  • phosphorylation in
  • expression in
  • survival
  • fragmentation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • soluble fraction
  • synaptic vesicle membrane
  • mother centriole
  • glutaminergic synapse
  • microtubule cytoskeleton
  • pericentriolar matrix
  • axon component
  • apical extension
  • cytoskeleton
  • Cytoplasm
  • cell surface
  • cell periphery
  • intracellular space
  • apical compartment
  • basal compartment
  • perinuclear region
  • postsynaptic region
  • filamentous network
  • cell cortex
  • Plasma Membrane
  • centrosome
  • Golgi Apparatus
  • centriole
  • Mitochondria
  • microtubules
  • microtubule bundles
  • microtubule tips
  • cell-cell contacts
  • granules
  • microtubule organizing centers
  • cytosol
  • apical cytoplasm
  • cytoplasmic face of plasma membrane
  • membrane ruffles
  • apical membrane
  • plasma membrane projections
  • lateral plasma membrane
  • nucleoplasm
  • nucleoli
  • nuclear rim
  • nuclear envelope
  • growth cone
  • neurites
  • nerve ending
  • apical cortex
  • fibrils
  • plus end of microtubule
  • tight junctions
  • apical cell-cell contacts
  • lateral cell-cell contacts
  • cellular protrusions
  • microvilli
  • cell membrane leading edge
  • kinetochores
  • perikaryon
  • axons
  • dendrites
  • cell-cell adherens junctions
  • lamellipodia
  • cytoskeletal fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the APC gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • mitotic cell cycle spindle assembly checkpoint
  • heart valve development
  • insulin receptor signaling pathway
  • negative regulation of cell proliferation
  • nervous system development
  • cell adhesion
  • endocardial cushion morphogenesis
  • cytokinesis after mitosis
  • negative regulation of G1/S transition of mitotic cell cycle
  • Wnt receptor signaling pathway
  • cell fate specification
  • cell migration
  • regulation of attachment of spindle microtubules to kinetochore
  • regulation of microtubule-based process
  • macromolecular complex assembly
  • positive regulation of pseudopodium assembly
  • negative regulation of microtubule depolymerization
  • positive regulation of protein catabolic process
  • pattern specification process
  • response to DNA damage stimulus
  • regulation of microtubule-based movement
  • negative regulation of cyclin-dependent protein kinase activity
  • negative regulation of canonical Wnt receptor signaling pathway
  • proteasomal ubiquitin-dependent protein catabolic process
  • positive regulation of apoptotic process
  • tight junction assembly
  • positive regulation of cell migration

CELLULAR COMPONENT

Where in the cell the gene product is active
  • lateral plasma membrane
  • Golgi apparatus
  • cytoplasmic microtubule
  • kinetochore
  • plasma membrane
  • microtubule
  • nucleoplasm
  • beta-catenin destruction complex
  • nucleus
  • centrosome
  • tight junction
  • adherens junction
  • perinuclear region of cytoplasm
  • cytoplasm
  • cytosol
  • ruffle membrane
  • catenin complex
  • lamellipodium

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • gamma-catenin binding
  • protein kinase binding
  • protein binding
  • ubiquitin protein ligase binding
  • cadherin binding
  • microtubule plus-end binding
  • dynein complex binding
  • beta-catenin binding
  • protein kinase regulator activity
  • microtubule binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.