Assay name
HS_ATXN1_1258487 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for ATXN1
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
ATXN1
Gene aliases
D6S504E;ATX1;SCA1
Species
Homo sapiens
Main target
ENST00000646259
Exons numbers
2-3
Ensembl exons ids
ENSE00003823347;ENSE00003824800
Amplicon start
175
Amplicon length
65
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000244769
Protein coding
CCDS34342
NM_000332
Chr.6: 16299112 - 16761456
ENST00000436367
Protein coding
CCDS34342
NM_001128164
Chr.6: 16299112 - 16761490
ENST00000473388
Processed transcript
Chr.6: 16485135 - 16761460
ENST00000495178
Processed transcript
Chr.6: 16614975 - 16753308
ENST00000646259
Processed transcript
Chr.6: 16614979 - 16761370