Assay name
HS_HLA-DQA1_1822451 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for HLA-DQA1
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
HLA-DQA1
Species
Homo sapiens
Main target
ENST00000442315
Exons numbers
2-3
Ensembl exons ids
ENSE00003560059;ENSE00003635251
Amplicon start
376
Amplicon length
93
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000442315
Protein coding
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32615727 - 32621893
ENST00000450960
Protein coding
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32615746 - 32621252
ENST00000453504
Protein coding
NM_002122
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32615683 - 32621893
ENST00000457246
Protein coding
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32615683 - 32621893
ENST00000461508
Nonsense mediated decay
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32615753 - 32621513
ENST00000477036
Processed transcript
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32615732 - 32621216
ENST00000482066
Processed transcript
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32619561 - 32621513
ENST00000497426
Retained intron
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32615757 - 32628863
ENST00000640446
Protein coding
Chr.CHR_HSCHR6_MHC_DBB_CTG1: 32615735 - 32621049