Assay name
HS_ECSIT_2474791 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for ECSIT
Best transcript assay for ENST00000588998
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000588998
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
ECSIT
Gene aliases
SITPEC
Species
Homo sapiens
Main target
ENST00000588998
Exons numbers
4-5
Ensembl exons ids
ENSE00001379383;ENSE00002955724
Amplicon start
264
Amplicon length
130
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000252440
Protein coding
CCDS45980
NM_001142464
Chr.19: 11505929 - 11529137
ENST00000270517
Protein coding
CCDS12262
NM_016581
Chr.19: 11505929 - 11529134
ENST00000417981
Protein coding
CCDS45979
NM_001142465
Chr.19: 11506002 - 11529172
ENST00000585898
Retained intron
Chr.19: 11506075 - 11507709
ENST00000588998
Protein coding
Chr.19: 11505929 - 11529096
ENST00000591104
Protein coding
CCDS59353
NM_001243204
Chr.19: 11506184 - 11528865
ENST00000592312
Protein coding
Chr.19: 11506301 - 11529124
ENST00000592571
Nonsense mediated decay
Chr.19: 11505958 - 11513168