CDH3

CDH3 Gene Summary

This gene encodes a classical cadherin of the cadherin superfamily. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed to generate the mature glycoprotein. This calcium-dependent cell-cell adhesion protein is comprised of five extracellular cadherin repeats, a transmembrane region and a highly conserved cytoplasmic tail. This gene is located in a gene cluster in a region on the long arm of chromosome 16 that is involved in loss of heterozygosity events in breast and prostate cancer. In addition, aberrant expression of this protein is observed in cervical adenocarcinomas. Mutations in this gene are associated with hypotrichosis with juvenile macular dystrophy and ectodermal dysplasia, ectrodactyly, and macular dystrophy syndrome (EEMS). [provided by RefSeq, Nov 2015]

Details

Type
Processed Transcript
Official Symbol
CDH3
Official Name
cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]
Ensembl ID
ENSG00000062038
Bio databases IDs NCBI: 1001 Ensembl: ENSG00000062038
Aliases cadherin 3, P-cadherin
Synonyms
cadherin 3,Cadp,CDHP,HJMD,PCAD,P-cadherin
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • Cadherin, Y-type LIR-motif
  • ectodomain
  • Cadherin repeat-like domain
  • membrane-proximal domain
  • extracellular cadherin structural domain

Pathways

Biological processes and signaling networks where the CDH3 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • AP2M1
  • CEBPB
  • BRCA1
  • SMURF2
  • RHOA
  • PCA062
  • IQGAP1
  • CTNNB1
  • GRB10
  • CDH1
disease
  • cancer
  • cutaneous melanoma
  • neoplasia
  • retinitis pigmentosa
  • renal cell carcinoma
  • renal cell cancer
  • congenital hypotrichosis with juvenile macular dystrophy
  • organismal death
  • breast cancer
  • prostate cancer
regulated by
  • APP
  • HRAS
  • CEBPB
  • TP53
  • SMAD4
  • growth hormone
  • S100A9
  • decitabine
  • doxorubicin
  • TNF
regulates
  • CDC42
  • CTNNB1
  • CDH2
  • SRC (family)
  • TEK
  • MMP2
  • ST3GAL1
  • OTULINL
  • CTNND1
  • CDH15
role in cell
  • expression in
  • apoptosis
  • proliferation
  • survival
  • cellular infiltration by
  • phosphorylation in
  • invasion by
  • activation in
  • transformation
  • invasion

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell junction
  • cell surface
  • cell borders
  • cellular membrane
  • cell-cell contacts
  • basal cell surfaces
  • apical membrane
  • anchoring junction
  • cell membrane leading edge
  • cell-cell adherens junctions
  • plasma
  • podocyte slit diaphragm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the CDH3 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • calcium-dependent cell-cell adhesion
  • cell-cell junction assembly
  • adherens junction organization
  • multicellular organismal development
  • cell morphogenesis
  • positive regulation of canonical Wnt receptor signaling pathway
  • cell adhesion
  • response to xenobiotic stimulus
  • hair cycle process
  • homophilic cell adhesion
  • visual perception
  • positive regulation of insulin-like growth factor receptor signaling pathway
  • negative regulation of catagen
  • positive regulation of melanin biosynthetic process
  • retina homeostasis
  • positive regulation of keratinocyte proliferation
  • cell-cell adhesion mediated by cadherin
  • positive regulation of gene expression
  • positive regulation of monophenol monooxygenase activity
  • keratinization
  • cell migration
  • negative regulation of transforming growth factor beta receptor signaling pathway

CELLULAR COMPONENT

Where in the cell the gene product is active
  • adherens junction
  • cytoplasm
  • cell junction
  • catenin complex
  • plasma membrane

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • calcium ion binding
  • cadherin binding
  • beta-catenin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.