CCR6

CCR6 Gene Summary

This gene encodes a member of the beta chemokine receptor family, which is predicted to be a seven transmembrane protein similar to G protein-coupled receptors. The gene is preferentially expressed by immature dendritic cells and memory T cells. The ligand of this receptor is macrophage inflammatory protein 3 alpha (MIP-3 alpha). This receptor has been shown to be important for B-lineage maturation and antigen-driven B-cell differentiation, and it may regulate the migration and recruitment of dentritic and T cells during inflammatory and immunological responses. Alternatively spliced transcript variants that encode the same protein have been described for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
CCR6
Official Name
C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]
Ensembl ID
ENSG00000112486
Bio databases IDs NCBI: 1235 Ensembl: ENSG00000112486
Aliases C-C motif chemokine receptor 6
Synonyms
BN-1,C-C CKR-6,C-C motif chemokine receptor 6,CD196,CKR-L3,CMKBR6,DCR2,DRY6,GPR29,GPRCY4,KY411,STRL22
Species
Human, homo_sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • G-protein coupled receptor
  • C-C chemokine receptor
  • Cholecystokinin A receptor, N-terminal
  • signaling receptor activity
  • chemokine receptor
  • C-C chemokine binding
  • 7 transmembrane receptor (rhodopsin family)
  • protein binding
  • seven-transmembrane G protein-coupled receptor superfamily

Pathways

Biological processes and signaling networks where the CCR6 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • CCL20
  • SLC4A2
  • CERS6
  • MT-CYB
  • SLC39A10
  • RINT1
  • ITPR3
  • ATP2A3
  • GPR89A
  • TMEM63A
disease
  • rheumatoid arthritis
  • experimental autoimmune encephalomyelitis
  • primary biliary cirrhosis
  • Huntington disease
  • hypersensitivity reaction type I
  • non-melanoma skin cancer
  • pulmonary emphysema
  • hypothyroidism
  • hepatic fibrosis
  • tuberculoid leprosy
regulated by
  • lipopolysaccharide
  • dendritic cells
  • hydroxypropyl-beta-cyclodextrin
  • ITGA9
  • STAT3
  • CCL20
  • IL12 (complex)
  • RC3H1
  • RC3H2
  • bortezomib
regulates
  • Ca2+
  • TNF
  • IL12 (family)
  • IL6
  • Ccl3
  • IL2
  • IFNG
  • IgM
  • MMP12
  • IgE
role in cell
  • apoptosis
  • quantity
  • chemotaxis
  • activation
  • expression in
  • migration
  • differentiation
  • function
  • clonal expansion
  • abnormal number

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • Cytoplasm
  • cell surface
  • intracellular space
  • cellular membrane
  • plasma membrane extracellular face
  • sperm midpiece
  • sperm tail

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the CCR6 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • positive regulation of sperm motility involved in capacitation
  • signal transduction
  • cell chemotaxis
  • elevation of cytosolic calcium ion concentration
  • cellular defense response
  • chemotaxis
  • leukocyte migration involved in inflammatory response
  • immune response
  • regulation of T cell migration
  • chemokine-mediated signaling pathway
  • dendritic cell chemotaxis
  • humoral immune response
  • positive regulation of dendritic cell chemotaxis
  • isotype switching to IgA isotypes
  • thymocyte migration
  • T cell migration
  • lymphocyte migration
  • calcium-mediated signaling

CELLULAR COMPONENT

Where in the cell the gene product is active
  • sperm midpiece
  • external side of plasma membrane
  • sperm principal piece
  • sperm flagellum
  • plasma membrane
  • cell surface

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • C-C chemokine binding
  • protein binding
  • signaling receptor activity
  • C-C chemokine receptor activity
  • chemokine receptor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.