ITGB7

ITGB7 Gene Summary

This gene encodes a protein that is a member of the integrin superfamily. Members of this family are adhesion receptors that function in signaling from the extracellular matrix to the cell. Integrins are heterodimeric integral membrane proteins composed of an alpha chain and a beta chain. The encoded protein forms dimers with an alpha4 chain or an alphaE chain and plays a role in leukocyte adhesion. Dimerization with alpha4 forms a homing receptor for migration of lymphocytes to the intestinal mucosa and Peyer's patches. Dimerization with alphaE permits binding to the ligand epithelial cadherin, a calcium-dependent adhesion molecule. Alternate splicing results in multiple transcript variants. Additional alternatively spliced transcript variants of this gene have been described, but their full-length nature is not known. [provided by RefSeq, Sep 2013]

Details

Type
Protein Coding
Official Symbol
ITGB7
Official Name
integrin subunit beta 7 [Source:HGNC Symbol;Acc:HGNC:6162]
Ensembl ID
ENSG00000139626
Bio databases IDs NCBI: 3695 Ensembl: ENSG00000139626
Aliases integrin subunit beta 7
Synonyms
CD103 beta,CD103 β,integrin beta 7,integrin subunit beta 7,integrin subunit β 7,Integrin β 7,Ly69
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • MIDAS motif
  • Integrin beta chain VWA domain
  • extracellular domain
  • Plexin repeat
  • Integrin plexin domain
  • cell adhesion molecule binding
  • protein binding
  • Integrin beta subunits (N-terminal portion of extracellular region)
  • EGF_CA
  • Integrin beta tail domain
  • Integrin beta cytoplasmic domain
  • cytoplasmic domain
  • vWFA
  • cytosolic tail domain
  • transmembrane receptor
  • Integrin beta epidermal growth factor like domain 1

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • YWHAE
  • PLEKHA3
  • FLNA
  • CCR5
  • CDH1
  • ITGAE
  • VCAM1
  • PPP2R5A
  • CANX
  • MADCAM1
disease
  • metastasis
  • diarrhea
  • cancer
  • eosinophilia
  • systemic lupus erythematosus
  • septic shock
  • ulcerative colitis
  • moderately to severely active Crohn disease
  • Crohn disease
  • refractory Crohn disease
regulated by
  • dexamethasone
  • cyclosporin A
  • Swiss 3T3 cells
  • lipopolysaccharide
  • IL2
  • TNF
  • tretinoin
  • USP7
  • SMAD4
  • tetrachlorodibenzodioxin
regulates
  • TNF
  • IFNG
  • FN1
  • MADCAM1
  • VCAM1
  • LPAM
  • SELP
  • receptor
role in cell
  • activation in
  • migration
  • induction
  • binding
  • degranulation
  • production in
  • recruitment
  • quantity
  • number
  • killing

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell surface
  • intracellular space
  • cellular membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the ITGB7 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • cell-matrix adhesion
  • viral entry into host cell
  • cell adhesion
  • receptor clustering
  • immune response in gut-associated lymphoid tissue
  • cell-matrix adhesion involved in ameboidal cell migration
  • cell adhesion mediated by integrin
  • integrin-mediated signaling pathway
  • substrate adhesion-dependent cell spreading
  • T cell migration
  • leukocyte migration
  • leukocyte tethering or rolling
  • heterotypic cell-cell adhesion

CELLULAR COMPONENT

Where in the cell the gene product is active
  • extracellular vesicular exosome
  • focal adhesion
  • membrane
  • receptor complex
  • integrin complex
  • alpha4-beta7 integrin complex
  • plasma membrane
  • cell surface

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • protein binding
  • metal ion binding
  • cell adhesion molecule binding
  • viral receptor activity
  • integrin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.