Assay name
MM_HDAC5_2118746 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Hdac5
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Hdac5
Species
Mus musculus
Main target
ENSMUST00000124077
Exons numbers
21-22
Ensembl exons ids
ENSMUSE00001212335;ENSMUSE00001298241
Amplicon start
2979
Amplicon length
100
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000008999
Protein coding
CCDS70320
NM_001284248
Chr.11: 102195744 - 102230124
ENSMUST00000107150
Protein coding
CCDS70321
NM_001284250
Chr.11: 102195751 - 102230136
ENSMUST00000107151
Protein coding
Chr.11: 102194432 - 102230166
ENSMUST00000107152
Protein coding
CCDS36341
NM_010412;NM_001284249;NM_001077696
Chr.11: 102195751 - 102230166
ENSMUST00000124077
Nonsense mediated decay
NM_001361596
Chr.11: 102195749 - 102230139
ENSMUST00000140481
Retained intron
Chr.11: 102196681 - 102198895
ENSMUST00000149087
Retained intron
Chr.11: 102195749 - 102218929