Assay name
HS_CHEK2_1905185 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for CHEK2
Best transcript assay for ENST00000416671
Assay targets 20 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000416671
Assay targets 20 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
CHEK2
Gene aliases
CDS1;CHK2;HuCds1;PP1425;bA444G7;RAD53
Species
Homo sapiens
Main target
ENST00000416671
Exons numbers
7-9
Ensembl exons ids
ENSE00003659846;ENSE00003578238;ENSE00003561775
Amplicon start
1532
Amplicon length
108
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000328354
Protein coding
CCDS13843
NM_001349956
Chr.22: 28687744 - 28741844
ENST00000348295
Protein coding
CCDS13844
NM_145862
Chr.22: 28687743 - 28741834
ENST00000382580
Protein coding
CCDS33629
NM_001005735
Chr.22: 28687763 - 28741838
ENST00000402731
Protein coding
CCDS13844
Chr.22: 28687897 - 28734721
ENST00000403642
Protein coding
Chr.22: 28687897 - 28734721
ENST00000404276
Protein coding
CCDS13843
NM_007194
Chr.22: 28687743 - 28741820
ENST00000405598
Protein coding
CCDS13843
Chr.22: 28687762 - 28741800
ENST00000416671
Nonsense mediated decay
Chr.22: 28687743 - 28742422
ENST00000417588
Nonsense mediated decay
Chr.22: 28687887 - 28734721
ENST00000425190
Protein coding
Chr.22: 28696968 - 28741811
ENST00000433028
Nonsense mediated decay
Chr.22: 28696902 - 28741806
ENST00000439346
Nonsense mediated decay
Chr.22: 28699764 - 28725248
ENST00000447421
Protein coding
Chr.22: 28696901 - 28734727
ENST00000448511
Nonsense mediated decay
Chr.22: 28687887 - 28734721
ENST00000456369
Protein coding
Chr.22: 28687743 - 28711955
ENST00000464581
Protein coding
Chr.22: 28696923 - 28712146
ENST00000491919
Retained intron
Chr.22: 28696944 - 28712257
ENST00000648295
Processed transcript
Chr.22: 28687744 - 28712495
ENST00000649563
Protein coding
NM_001257387
Chr.22: 28687751 - 28741806
ENST00000650281
Protein coding
CCDS13843
Chr.22: 28687766 - 28741806