Assay name
HS_SMARCD3_1862520 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SMARCD3
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
SMARCD3
Gene aliases
BAF60C;Rsc6p;CRACD3
Species
Homo sapiens
Main target
ENST00000469154
Exons numbers
2-3
Ensembl exons ids
ENSE00003635502;ENSE00003653447
Amplicon start
167
Amplicon length
100
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000262188
Protein coding
CCDS34780
NM_001003801
Chr.7: 151238973 - 151248973
ENST00000356800
Protein coding
CCDS5924
NM_001003802
Chr.7: 151238976 - 151276734
ENST00000392811
Protein coding
CCDS5924
NM_003078
Chr.7: 151238973 - 151277452
ENST00000460431
Processed transcript
Chr.7: 151242481 - 151246149
ENST00000469154
Nonsense mediated decay
Chr.7: 151238974 - 151275252
ENST00000472103
Retained intron
Chr.7: 151241799 - 151243686
ENST00000472988
Retained intron
Chr.7: 151240900 - 151248685
ENST00000477169
Processed transcript
Chr.7: 151241958 - 151254478
ENST00000485592
Nonsense mediated decay
Chr.7: 151240422 - 151245513
ENST00000485610
Retained intron
Chr.7: 151241258 - 151248646
ENST00000491651
Protein coding
Chr.7: 151242721 - 151277896