Pdgfra Gene Summary [Mouse]

This gene encodes a member of the receptor tyrosine kinase family of proteins. Binding of platelet-derived growth factor protein ligands to this receptor triggers receptor dimerization and autophosphorylation, resulting in the activation of several downstream signaling pathways. Signaling through the encoded receptor plays a role in gastrulation and the development of nearly all organ systems. Mice lacking a functional copy of this gene reportedly exhibit defects in lung, skeleton, testis and the central nervous system, and die soon after birth. Alternative splicing and intronic polyadenylation of gene transcripts have been implicated in muscle regeneration and fibrosis in adult mice. [provided by RefSeq, Jan 2017]

Details

Type
Protein Coding
Official Symbol
Pdgfra
Official Name
platelet derived growth factor receptor, alpha polypeptide [Source:MGI Symbol;Acc:MGI:97530]
Ensembl ID
ENSMUSG00000029231
Bio databases IDs NCBI: 18595 Ensembl: ENSMUSG00000029231
Aliases platelet derived growth factor receptor, alpha polypeptide
Synonyms APDGFR, CD140A, LOC102554024, PDGFACE, Pdgfar, PDGFR-2, PDGFR alpha, Pdgf receptor-α, PDGFR α, PDGF α R, Pdgf α Receptor, platelet derived growth factor receptor alpha, platelet derived growth factor receptor, alpha polypeptide, platelet derived growth factor receptor α, platelet derived growth factor receptor, α polypeptide, α-pdgfr
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Pdgfra often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • protein kinase
  • platelet-derived growth factor receptor alpha
  • protein-tyrosine kinase
  • Protein kinase domain
  • activation loop
  • phospholipase activator
  • cytoplasmic domain
  • Immunoglobulin like
  • intracellular domain
  • immunoglobulin-like protein domain
  • vascular endothelial growth factor receptor
  • membrane-proximal domain
  • Tyrosine kinase, catalytic domain
  • growth factor binding
  • transmembrane receptor
  • extracellular domain
  • Protein kinase (unclassified specificity)
  • Protein tyrosine and serine/threonine kinase
  • immunoglobulin domain
  • platelet-derived growth factor receptor binding
  • Immunoglobulin I-set domain
  • protein binding
  • kinase
  • Serine/Threonine protein kinases, catalytic domain
  • kinase domain
  • phosphoinositide 3-kinase binding
  • binding protein
  • Protein Kinases, catalytic domain
  • transmembrane receptor protein tyrosine kinase
  • transmembrane domain
  • tyrosine kinase domain
  • protein homodimerization

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulates
regulated by
disease
  • diabetic neuropathy
  • precursor B-cell acute lymphoblastic leukemia
  • COVID-19
  • bleeding
  • vascular disease
  • metastasis
  • neoplasia
  • epithelial cancer
  • cancer
  • edema
phenotypes
  • abnormal cervical vertebrae morphology
  • abnormal cranial neural crest cell morphology
  • abnormal diaphragm development
  • abnormal frontal bone morphology
  • abnormal heart septum morphology
  • abnormal immune system organ morphology
  • abnormal kidney pelvis morphology
  • abnormal locomotor coordination
  • abnormal lung development
  • abnormal mesenchyme morphology
  • abnormal myelination
  • abnormal myotome development
  • abnormal myotome morphology
  • abnormal nasal bone morphology
  • abnormal neural tube morphology
  • abnormal oligodendrocyte morphology
  • abnormal parietal bone morphology
  • abnormal pectoral girdle bone morphology
  • abnormal placenta development
  • abnormal placenta vasculature
  • abnormal pubis morphology
  • abnormal pulmonary alveolus morphology
  • abnormal rib joint morphology
  • abnormal rib morphology
  • abnormal scapula morphology
  • abnormal skeleton morphology
  • abnormal spine curvature
  • abnormal sternum morphology
  • abnormal stomach morphology
  • abnormal thoracic vertebrae morphology
  • abnormal trophoblast layer morphology
  • abnormal ureter development
  • abnormal ureter morphology
  • abnormal ureter smooth muscle morphology
  • abnormal vitelline vasculature morphology
  • absent roof plate
  • absent sternum
  • absent zygomatic bone
  • acromion hypoplasia
  • cleft palate
  • cleft secondary palate
  • decreased body size
  • decreased embryo size
  • decreased oligodendrocyte progenitor number
  • diaphragmatic hernia
  • dilated ureter
  • ectopic cranial bone
  • edema
  • embryonic growth retardation
  • embryonic lethality during organogenesis complete penetrance
  • embryonic lethality during organogenesis incomplete penetrance
  • emphysema
  • enlarged placenta
  • esophagus hyperplasia
  • failure of initiation of embryo turning
  • failure of somite differentiation
  • fetal bleb
  • hemorrhage
  • herniated abdominal wall
  • hydronephrosis
  • hydrops fetalis
  • impaired ossification of basisphenoid bone
  • incomplete embryo turning
  • incomplete rostral neuropore closure
  • increased apoptosis
  • increased cell proliferation
  • increased embryo size
  • increased fetal size
  • increased fibroblast chemotaxis
  • increased fibroblast proliferation
  • increased mesenchymal cell proliferation involved in lung development
  • lethality throughout fetal growth and development incomplete penetrance
  • midline facial cleft
  • neonatal lethality incomplete penetrance
  • no abnormal phenotype detected
  • open neural tube
  • palatal shelves fail to meet at midline
  • pericardial edema
  • polydactyly
  • postnatal lethality complete penetrance
  • postnatal lethality incomplete penetrance
  • premature death
  • prenatal lethality
  • prenatal lethality complete penetrance
  • pulmonary hyperplasia
  • pulmonary hypoplasia
  • respiratory failure
  • rib bifurcation
  • rib fusion
  • seizures
  • short ureter
  • skin edema
  • spina bifida
  • thin epidermis
  • tremors
  • ureter obstruction
  • ventricular septal defect
  • wavy neural tube
  • wide sternum
role in cell
  • expression in
  • growth
  • apoptosis
  • activation in
  • proliferation
  • phosphorylation in
  • migration
  • cell viability
  • quantity
  • differentiation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell junction
  • Cytoplasm
  • cilia
  • cell surface
  • membrane surface
  • cellular membrane
  • Nucleus
  • Golgi Apparatus
  • cytosol
  • endoplasmic reticulum membrane
  • plasma membrane extracellular face
  • nucleoplasm
  • nuclear bodies
  • axon initial segments
  • cellular protrusions
  • microvilli
  • perikaryon
  • axons
  • dendrites
  • plasma
  • detergent-soluble fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Pdgfra gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • retina vasculature development in camera-type eye
  • peptidyl-tyrosine phosphorylation
  • multicellular organismal development
  • positive regulation of cell proliferation
  • palate development
  • signal transduction involved in regulation of gene expression
  • protein autophosphorylation
  • embryonic digestive tract morphogenesis
  • odontogenesis of dentin-containing tooth
  • positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway
  • hemopoietic progenitor cell differentiation
  • face morphogenesis
  • cell chemotaxis
  • positive regulation of calcium-mediated signaling
  • white fat cell differentiation
  • cellular response to amino acid stimulus
  • regulation of mesenchymal stem cell differentiation
  • wound healing
  • in utero embryonic development
  • positive regulation of fibroblast proliferation
  • cardiac myofibril assembly
  • positive regulation of kinase activity
  • platelet aggregation
  • adrenal gland development
  • lung development
  • estrogen metabolic process
  • platelet-derived growth factor receptor-alpha signaling pathway
  • transmembrane receptor protein tyrosine kinase signaling pathway
  • platelet-derived growth factor receptor signaling pathway
  • embryonic cranial skeleton morphogenesis
  • embryonic skeletal system morphogenesis
  • luteinization
  • cell activation
  • regulation of actin cytoskeleton organization
  • male genitalia development
  • metanephric glomerular capillary formation
  • positive regulation of ERK1 and ERK2 cascade
  • extracellular matrix organization
  • negative regulation of platelet activation
  • cellular response to reactive oxygen species
  • Leydig cell differentiation
  • positive regulation of chemotaxis
  • positive regulation of protein kinase B signaling cascade
  • positive regulation of cell migration

Cellular Component

Where in the cell the gene product is active
  • external side of plasma membrane
  • Golgi apparatus
  • receptor complex
  • plasma membrane
  • nucleoplasm
  • endoplasmic reticulum membrane
  • nucleus
  • cytoplasm
  • microvillus
  • membrane
  • cilium
  • cell junction
  • macromolecular complex

Molecular Function

What the gene product does at the molecular level
  • ATP binding
  • platelet-derived growth factor alpha-receptor activity
  • protein homodimerization activity
  • protein binding
  • platelet-derived growth factor receptor binding
  • transmembrane receptor protein tyrosine kinase activity
  • vascular endothelial growth factor-activated receptor activity
  • protein kinase activity
  • vascular endothelial growth factor binding
  • platelet-derived growth factor binding

Gene-Specific Assays for Results You Can Trust

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