Assay name​
MM_XPA_2197197 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for Xpa
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
Xpa
Species​
Mus musculus
Main target​
ENSMUST00000058232
Exons numbers​
3-4
Ensembl exons ids​
ENSMUSE00001256378;ENSMUSE00001222222
Amplicon start​
449
Amplicon length​
68
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000030013
Protein coding
CCDS18146
NM_011728
Chr.4: 46175222 - 46196311
ENSMUST00000058232
Protein coding
Chr.4: 46155347 - 46196311
ENSMUST00000130051
Processed transcript
Chr.4: 46184412 - 46186594
ENSMUST00000132358
Nonsense mediated decay
Chr.4: 46175222 - 46185649
ENSMUST00000141318
Processed transcript
Chr.4: 46175222 - 46185682
ENSMUST00000142380
Protein coding
Chr.4: 46182969 - 46196304