Assay name
HS_RUNX1T1_1245850 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for RUNX1T1
Assay targets 35 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 35 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
RUNX1T1
Gene aliases
CDR;ETO;MTG8;ZMYND2;AML1T1;CBFA2T1
Species
Homo sapiens
Main target
ENST00000521897
Exons numbers
3-4
Ensembl exons ids
ENSE00003471634;ENSE00002110031
Amplicon start
390
Amplicon length
105
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000265814
Protein coding
CCDS6256
NM_001198628
Chr.8: 91954967 - 92099688
ENST00000360348
Protein coding
CCDS6257
NM_175635
Chr.8: 91959787 - 92095215
ENST00000396218
Protein coding
CCDS47891
NM_004349
Chr.8: 91958924 - 92062963
ENST00000422361
Protein coding
CCDS6257
NM_175636
Chr.8: 91959793 - 92017637
ENST00000436581
Protein coding
CCDS75766
NM_001198679
Chr.8: 91954967 - 92095654
ENST00000517792
Protein coding
Chr.8: 92011088 - 92071387
ENST00000517919
Protein coding
Chr.8: 92014641 - 92095637
ENST00000518317
Protein coding
Chr.8: 92014757 - 92095235
ENST00000518823
Protein coding
Chr.8: 92014728 - 92095416
ENST00000518832
Protein coding
Chr.8: 92014798 - 92103286
ENST00000518844
Protein coding
CCDS47891
NM_001198625
Chr.8: 91960242 - 92095613
ENST00000518992
Protein coding
Chr.8: 92005168 - 92095230
ENST00000519422
Nonsense mediated decay
Chr.8: 92014766 - 92095482
ENST00000519577
Nonsense mediated decay
Chr.8: 92014725 - 92102907
ENST00000519847
Protein coding
Chr.8: 92011053 - 92095654
ENST00000520556
Protein coding
Chr.8: 92014661 - 92095235
ENST00000520583
Protein coding
Chr.8: 92014686 - 92095478
ENST00000520724
Protein coding
CCDS56544
NM_001198634
Chr.8: 91960131 - 92095611
ENST00000520974
Protein coding
Chr.8: 92014792 - 92095510
ENST00000521054
Protein coding
Chr.8: 92005231 - 92019175
ENST00000521319
Protein coding
Chr.8: 92014670 - 92095236
ENST00000521375
Protein coding
Chr.8: 92014766 - 92095257
ENST00000521553
Protein coding
Chr.8: 92004422 - 92017363
ENST00000521733
Protein coding
Chr.8: 92014661 - 92063623
ENST00000521897
Nonsense mediated decay
Chr.8: 92014747 - 92095450
ENST00000522467
Protein coding
Chr.8: 92014579 - 92099656
ENST00000523168
Protein coding
Chr.8: 92014688 - 92099688
ENST00000523290
Retained intron
Chr.8: 92009646 - 92095262
ENST00000523629
Protein coding
CCDS6256
NM_175634
Chr.8: 91954975 - 92103226
ENST00000524215
Nonsense mediated decay
Chr.8: 92014788 - 92102913
ENST00000613302
Protein coding
CCDS6256
NM_001198627;NM_001198630
Chr.8: 91954967 - 92095654
ENST00000613886
Protein coding
CCDS47891
NM_001198632
Chr.8: 91954967 - 92095262
ENST00000614812
Protein coding
CCDS6256
NM_001198631
Chr.8: 91954967 - 92095654
ENST00000615601
Protein coding
CCDS75767
NM_001198633
Chr.8: 91954967 - 92103226
ENST00000617740
Protein coding
CCDS6256
NM_001198626;NM_001198629
Chr.8: 91954967 - 92095654