Assay name
HS_ATG12_1291227 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for ATG12
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
ATG12
Gene aliases
APG12;APG12L
Species
Homo sapiens
Main target
ENST00000513322
Exons numbers
3-4
Ensembl exons ids
ENSE00003556408;ENSE00002046162
Amplicon start
1202
Amplicon length
104
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000379594
Nonsense mediated decay
Chr.5: 115831546 - 115841837
ENST00000500945
Protein coding
CCDS64222
NM_001277783
Chr.5: 115830673 - 115841565
ENST00000505252
Retained intron
Chr.5: 115830341 - 115834352
ENST00000505993
Nonsense mediated decay
Chr.5: 115831584 - 115841565
ENST00000507793
Retained intron
Chr.5: 115831275 - 115833666
ENST00000508464
Retained intron
Chr.5: 115831488 - 115838312
ENST00000509598
Processed transcript
Chr.5: 115831582 - 115839494
ENST00000509910
Protein coding
CCDS4122
NM_004707
Chr.5: 115828200 - 115841565
ENST00000511984
Retained intron
Chr.5: 115831514 - 115837781
ENST00000513167
Nonsense mediated decay
Chr.5: 115831720 - 115841544
ENST00000513292
Processed transcript
Chr.5: 115831479 - 115835161
ENST00000513322
Nonsense mediated decay
Chr.5: 115831512 - 115841823