Assay name
HS_HDAC10_2474872 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for HDAC10
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
HDAC10
Gene aliases
DKFZP761B039
Species
Homo sapiens
Main target
ENST00000216271
Exons numbers
5-6
Ensembl exons ids
ENSE00003535827;ENSE00003579541
Amplicon start
673
Amplicon length
64
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000216271
Protein coding
CCDS14088
NM_032019
Chr.22: 50245183 - 50251265
ENST00000349505
Protein coding
CCDS54545
NM_001159286
Chr.22: 50245507 - 50251032
ENST00000429374
Nonsense mediated decay
Chr.22: 50245405 - 50251079
ENST00000448072
Protein coding
Chr.22: 50245442 - 50251240
ENST00000454936
Nonsense mediated decay
Chr.22: 50245442 - 50251032
ENST00000483222
Processed transcript
Chr.22: 50245442 - 50251242
ENST00000488270
Retained intron
Chr.22: 50249287 - 50250255
ENST00000496909
Processed transcript
Chr.22: 50248695 - 50250890
ENST00000498366
Processed transcript
Chr.22: 50245442 - 50251366
ENST00000626012
Protein coding
Chr.22: 50245186 - 50251405