Assay name
HS_PTPRE_1623232 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for PTPRE
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
PTPRE
Gene aliases
PTPE
Species
Homo sapiens
Main target
ENST00000254667
Exons numbers
5-6
Ensembl exons ids
ENSE00003684247;ENSE00003786459
Amplicon start
495
Amplicon length
95
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000254667
Protein coding
CCDS7657
NM_001316676;NM_006504;NM_001323355;NM_001323356;NM_001316677;NM_001323354
Chr.10: 127907061 - 128085855
ENST00000306042
Protein coding
CCDS7658
NM_130435;NM_001323357
Chr.10: 128047570 - 128085855
ENST00000442830
Protein coding
Chr.10: 127907152 - 128049666
ENST00000455661
Protein coding
Chr.10: 127998126 - 128056163
ENST00000467366
Protein coding
Chr.10: 128047406 - 128056171
ENST00000471218
Protein coding
Chr.10: 127987344 - 128056170
ENST00000479896
Nonsense mediated decay
Chr.10: 128047631 - 128085855
ENST00000487428
Retained intron
Chr.10: 128047619 - 128049635
ENST00000495530
Nonsense mediated decay
Chr.10: 128047629 - 128070375