Assay name
HS_PDGFRA_2475116 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for PDGFRA
Best transcript assay for ENST00000257290
Assay targets 3 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000257290
Assay targets 3 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
PDGFRA
Gene aliases
CD140a;PDGFR2;GAS9
Species
Homo sapiens
Main target
ENST00000257290
Exons numbers
5-6
Ensembl exons ids
ENSE00003580939;ENSE00003566972
Amplicon start
863
Amplicon length
63
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000257290
Protein coding
CCDS3495
NM_001347828;NM_006206;NM_001347829;NM_001347830
Chr.4: 54229293 - 54298245
ENST00000509092
Retained intron
Chr.4: 54229292 - 54280758
ENST00000509490
Nonsense mediated decay
NM_001347827
Chr.4: 54229311 - 54281978