Assay name​
HS_ATP2C1_1457780 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for ATP2C1
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
ATP2C1
Gene aliases​
KIAA1347;ATP2C1A;PMR1;SPCA1;BCPM
Species​
Homo sapiens
Main target​
ENST00000510168
Exons numbers​
26-27
Ensembl exons ids​
ENSE00003538891;ENSE00003523924
Amplicon start​
3009
Amplicon length​
96
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000328560
Protein coding
CCDS46913
NM_001199185
Chr.3: 130894448 - 131016684
ENST00000359644
Protein coding
CCDS33856
NM_001001486
Chr.3: 130894641 - 131016669
ENST00000422190
Protein coding
CCDS46912
NM_001001487
Chr.3: 130894641 - 131016684
ENST00000428331
Protein coding
CCDS46914
NM_014382
Chr.3: 130894535 - 131003150
ENST00000504381
Protein coding
CCDS56279
NM_001199182
Chr.3: 130850595 - 131016684
ENST00000504612
Protein coding
Chr.3: 130932044 - 131016684
ENST00000504948
Protein coding
CCDS56281
NM_001199184
Chr.3: 130894178 - 131003150
ENST00000505330
Protein coding
CCDS75006
NM_001199181
Chr.3: 130850595 - 131003150
ENST00000507194
Nonsense mediated decay
Chr.3: 130994070 - 131001342
ENST00000507488
Protein coding
CCDS56278
NM_001199180
Chr.3: 130850601 - 131016684
ENST00000508532
Protein coding
CCDS46914
NM_001199179
Chr.3: 130893991 - 131003150
ENST00000510168
Protein coding
CCDS46914
Chr.3: 130893968 - 131003107
ENST00000513801
Protein coding
CCDS56280
NM_001199183
Chr.3: 130894178 - 131016712
ENST00000514654
Retained intron
Chr.3: 130962902 - 131003150
ENST00000533801
Protein coding
CCDS46913
NM_001001485
Chr.3: 130894015 - 131016709