Assay name​
MM_CTNNA1_1957037 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for Ctnna1
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
Ctnna1
Species​
Mus musculus
Main target​
ENSMUST00000236571
Exons numbers​
3-4
Ensembl exons ids​
ENSMUSE00001458194;ENSMUSE00001460060
Amplicon start​
347
Amplicon length​
108
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000042345
Protein coding
CCDS29139
NM_009818
Chr.18: 35118859 - 35254779
ENSMUST00000236037
Protein coding
Chr.18: 35118913 - 35223524
ENSMUST00000236571
Retained intron
Chr.18: 35118883 - 35175651
ENSMUST00000236969
Retained intron
Chr.18: 35118887 - 35183050
ENSMUST00000237154
Protein coding
Chr.18: 35119442 - 35174419