Assay name​
HS_ARHGEF9_1609247 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for ARHGEF9
Assay targets 29 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 29 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
ARHGEF9
Gene aliases​
KIAA0424;PEM-2
Species​
Homo sapiens
Main target​
ENST00000623566
Exons numbers​
3-4
Ensembl exons ids​
ENSE00003479875;ENSE00003760013
Amplicon start​
442
Amplicon length​
81
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000253401
Protein coding
CCDS35315
NM_001353924;NM_001353928;NM_015185
Chr.X: 63634967 - 63755113
ENST00000374870
Protein coding
Chr.X: 63634971 - 63755089
ENST00000374872
Protein coding
CCDS83477
Chr.X: 63637982 - 63755127
ENST00000374878
Protein coding
Chr.X: 63634967 - 63785546
ENST00000437457
Protein coding
Chr.X: 63636331 - 63785524
ENST00000495564
Nonsense mediated decay
Chr.X: 63637746 - 63755143
ENST00000623417
Protein coding
Chr.X: 63678496 - 63809274
ENST00000623517
Protein coding
CCDS55430
NM_001353922;NM_001353921;NM_001173479
Chr.X: 63637690 - 63785558
ENST00000623566
Protein coding
Chr.X: 63697221 - 63755335
ENST00000624210
Protein coding
CCDS83477
Chr.X: 63637840 - 63755078
ENST00000624355
Protein coding
Chr.X: 63697276 - 63785215
ENST00000624843
Protein coding
CCDS55429
NM_001353926;NM_001173480
Chr.X: 63637985 - 63755063
ENST00000625116
Protein coding
Chr.X: 63678504 - 63785215
ENST00000635729
Protein coding
CCDS87753
NM_001353923
Chr.X: 63637868 - 63755216
ENST00000635967
Protein coding
CCDS83477
Chr.X: 63637982 - 63755098
ENST00000636048
Protein coding
CCDS83477
NM_001330495
Chr.X: 63635003 - 63754747
ENST00000636276
Protein coding
Chr.X: 63639446 - 63755056
ENST00000636392
Protein coding
CCDS83477
Chr.X: 63638027 - 63754684
ENST00000636926
Protein coding
Chr.X: 63639415 - 63755127
ENST00000637040
Protein coding
Chr.X: 63635003 - 63754711
ENST00000637178
Protein coding
CCDS83477
Chr.X: 63637906 - 63754731
ENST00000637417
Protein coding
CCDS83477
NM_001353927
Chr.X: 63635161 - 63755123
ENST00000637520
Protein coding
CCDS83477
Chr.X: 63635015 - 63755124
ENST00000637557
Protein coding
CCDS83477
Chr.X: 63635299 - 63754740
ENST00000637723
Protein coding
Chr.X: 63637982 - 63755113
ENST00000637855
Nonsense mediated decay
Chr.X: 63655616 - 63706360
ENST00000638021
Protein coding
Chr.X: 63635003 - 63754755
ENST00000639092
Nonsense mediated decay
Chr.X: 63635071 - 63754340