Assay name
HS_XRCC3_1555220 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for XRCC3
Best transcript assay for ENST00000553332
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000553332
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
XRCC3
Species
Homo sapiens
Main target
ENST00000553332
Exons numbers
3-4
Ensembl exons ids
ENSE00002447510;ENSE00002476612
Amplicon start
459
Amplicon length
80
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000352127
Protein coding
CCDS9984
NM_001100118
Chr.14: 103697617 - 103715504
ENST00000553264
Protein coding
CCDS9984
Chr.14: 103697618 - 103712104
ENST00000553332
Protein coding
Chr.14: 103708572 - 103715486
ENST00000553361
Protein coding
Chr.14: 103706332 - 103715459
ENST00000554170
Protein coding
Chr.14: 103708579 - 103714213
ENST00000554913
Protein coding
CCDS9984
Chr.14: 103697609 - 103715443
ENST00000555055
Protein coding
CCDS9984
NM_001100119;NM_005432
Chr.14: 103697617 - 103715451
ENST00000555231
Retained intron
Chr.14: 103708429 - 103715459
ENST00000555964
Protein coding
Chr.14: 103707103 - 103715484
ENST00000556682
Protein coding
Chr.14: 103708530 - 103715484
ENST00000556980
Protein coding
Chr.14: 103707071 - 103714250
ENST00000557439
Nonsense mediated decay
Chr.14: 103704396 - 103715483