Assay name
HS_PSTPIP1_1894318 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for PSTPIP1
Best transcript assay for ENST00000558012
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000558012
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
PSTPIP1
Gene aliases
PSTPIP;CD2BP1L;CD2BP1;CD2BP1S;H-PIP;PAPAS
Species
Homo sapiens
Main target
ENST00000558012
Exons numbers
5-7
Ensembl exons ids
ENSE00003503526;ENSE00003468751;ENSE00003636486
Amplicon start
802
Amplicon length
129
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000379595
Protein coding
Chr.15: 76995131 - 77037331
ENST00000558012
Protein coding
CCDS45312
NM_001321137;NM_001321136;NM_003978
Chr.15: 76995085 - 77037332
ENST00000559161
Protein coding
Chr.15: 76995419 - 77030574
ENST00000559295
Protein coding
CCDS81910
NM_001321135
Chr.15: 76995574 - 77037331
ENST00000559750
Nonsense mediated decay
Chr.15: 76995172 - 77031761
ENST00000559785
Nonsense mediated decay
Chr.15: 76994680 - 77037301
ENST00000559856
Protein coding
Chr.15: 77018458 - 77032393
ENST00000559859
Protein coding
Chr.15: 77015811 - 77028598
ENST00000560223
Nonsense mediated decay
Chr.15: 76995122 - 77037216
ENST00000560377
Retained intron
Chr.15: 76995385 - 77032863
ENST00000560796
Nonsense mediated decay
Chr.15: 76995412 - 77029556