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Phagosome Maturation

Phagosome maturation is the process by which internalized particles (such as bacteria and apoptotic cells) are trafficked into a series of increasingly acidified membrane-bound structures, leading to particle degradation. Phagosome maturation starts immediately after, and possibly even before, phagosome sealing. After scission from the surface membrane, the phagosome undergoes sequential fusion with early endosomes, late endosomes and lysosomes. Remodeling of the membrane of the phagosome is accompanied by acute changes in the composition of its lumen, which becomes a highly acidic, oxidative and degradative milieu....

Phagosome Maturation

Pathway Summary

Phagosome maturation is the process by which internalized particles (such as bacteria and apoptotic cells) are trafficked into a series of increasingly acidified membrane-bound structures, leading to particle degradation. Phagosome maturation starts immediately after, and possibly even before, phagosome sealing. After scission from the surface membrane, the phagosome undergoes sequential fusion with early endosomes, late endosomes and lysosomes. Remodeling of the membrane of the phagosome is accompanied by acute changes in the composition of its lumen, which becomes a highly acidic, oxidative and degradative milieu.The GTPase Rab5 integrates the targeting, tethering and fusion of early endosomes and interacts using multiple effectors, including the VPSS34 complex, early endosome antigen 1 (EEA1) and SNARE proteins. Acidification of the phagosome occurs via a vATPase that translocates H+ across the membrane bilayer. Phagosomal acidification creates a hostile environment that impedes microbial growth. The ESCRT complexes function to sort endosomal proteins into the luminal vesicles of multivesicular bodies. The multivesicular bodies (MVB) generated by the combined action of the ESCRT complexes are a subset of endosomes that have intraluminal vesicles and are thought to be important in receptor down-regulation and in antigen presentation as well as formation of the intermediate phagosome.Once recycling proteins are removed, the phagosome proceeds to the late stage, which is characterized by a more acidic lumen brought about by the insertion of additional proton-pumping v-ATPases. Recruitment of Rab7 by phagosomes is found to precede and to be essential for optimal fusion with lysosomes and other late-endocytic organelles. In addition, phagosomal association of RILP, which follows shortly after Rab7 recruitment, is also essential for fusion with late-endocytic compartments. The late phagosome is also enriched in proteases and lysosomal-associated membrane proteins (LAMPs), which are either imported from the Golgi complex or acquired by fusion with late endosomes.The maturation process culminates with the formation of the phagolysosome. The phagolysosome is formed by the fusion of the mature phagosome with a series of lysosomes through a Rab7 dependent process and are highly acidic (luminal pH values as low as 4.5 have been reported). Insertion of additional v-ATPases and tightening of the H+ leak account for the accentuated acidification. Phagolysosomes can be differentiated from late phagosomes by their paucity of LBPA or PI(3)P-enriched internal membranes, by their elevated mature cathepsin content and by their lack of mannose-6-phosphate receptors. When the membranes of the phagosome and lysosome meet, the contents of the lysosome explosively discharge, releasing a variety of macromolecules that degrade the contents. An additional model in phagosome formation/maturation involves the fusion of the endoplasmic reticulum (ER) with the membrane underneath phagocytic cups. Successive waves of ER become associated with maturing phagosomes during phagolysosome biogenesis. After phagocytosis, antigens are exported into the cytosol and degraded by the proteasome.

Phagosome Maturation Genes list

Explore Genes related to Phagosome Maturation
ATP6V0A1
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Human
ATPase H+ transporting V0 subunit a1
B2M
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Human
beta-2-microglobulin
BET1L
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Human
Bet1 golgi vesicular membrane trafficking protein like
CALR
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Human
calreticulin
CANX
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Human
calnexin
CYBB
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Human
cytochrome b-245 beta chain
DCTN4
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Human
dynactin subunit 4
DYNC1H1
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Human
dynein cytoplasmic 1 heavy chain 1
DYNC1I1
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Human
dynein cytoplasmic 1 intermediate chain 1
DYNC1I2
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Human
dynein cytoplasmic 1 intermediate chain 2
DYNC1LI1
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Human
dynein cytoplasmic 1 light intermediate chain 1
DYNC1LI2
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Human
dynein cytoplasmic 1 light intermediate chain 2
DYNC2H1
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Human
dynein cytoplasmic 2 heavy chain 1
DYNC2I1
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Human
dynein 2 intermediate chain 1
DYNC2I2
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Human
dynein 2 intermediate chain 2
DYNC2LI1
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Human
dynein cytoplasmic 2 light intermediate chain 1
DYNLL1
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Human
dynein light chain LC8-type 1
DYNLL2
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Human
dynein light chain LC8-type 2
DYNLRB1
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Human
dynein light chain roadblock-type 1
DYNLRB2
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Human
dynein light chain roadblock-type 2
DYNLT1
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Human
dynein light chain Tctex-type 1
DYNLT2
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Human
dynein light chain Tctex-type 2
DYNLT3
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Human
dynein light chain Tctex-type 3
EEA1
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Human
early endosome antigen 1
GOSR1
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Human
golgi SNAP receptor complex member 1
GOSR2
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Human
golgi SNAP receptor complex member 2
GPAA1
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Human
glycosylphosphatidylinositol anchor attachment 1
HLA-A
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Human
major histocompatibility complex, class I, A
HLA-B
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Human
major histocompatibility complex, class I, B
HLA-C
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Human
major histocompatibility complex, class I, C
HLA-E
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Human
major histocompatibility complex, class I, E
HLA-F
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Human
major histocompatibility complex, class I, F
HLA-G
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Human
major histocompatibility complex, class I, G
LAMP1
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Human
lysosomal associated membrane protein 1
LAMP2
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Human
lysosomal associated membrane protein 2
M6PR
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Human
mannose-6-phosphate receptor, cation dependent
MPO
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Human
myeloperoxidase
MR1
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Human
major histocompatibility complex, class I-related
NAPA
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Human
NSF attachment protein alpha
NAPB
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Human
NSF attachment protein beta
NAPG
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Human
NSF attachment protein gamma
NCF1
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Human
neutrophil cytosolic factor 1
NCF2
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Human
neutrophil cytosolic factor 2
NOS1
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Human
nitric oxide synthase 1
NOX1
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Human
NADPH oxidase 1
NOX3
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Human
NADPH oxidase 3
NOX4
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Human
NADPH oxidase 4
NSF
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Human
N-ethylmaleimide sensitive factor, vesicle fusing ATPase
PIK3C3
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Human
phosphatidylinositol 3-kinase catalytic subunit type 3
PIKFYVE
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Human
phosphoinositide kinase, FYVE-type zinc finger containing
RAB5A
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Human
RAB5A, member RAS oncogene family
RAB5B
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Human
RAB5B, member RAS oncogene family
RAB5C
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Human
RAB5C, member RAS oncogene family
RAB7A
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Human
RAB7A, member RAS oncogene family
RAB7B
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Human
RAB7B, member RAS oncogene family
RAC1
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Human
Rac family small GTPase 1
RAC2
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Human
Rac family small GTPase 2
RAC3
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Human
Rac family small GTPase 3
RILP
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Human
Rab interacting lysosomal protein
SNAP25
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Human
synaptosome associated protein 25
STX16
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Human
syntaxin 16
STX1A
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Human
syntaxin 1A
STX1B
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Human
syntaxin 1B
TAP1
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Human
transporter 1, ATP binding cassette subfamily B member
TUBA1A
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Human
tubulin alpha 1a
TUBA1B
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Human
tubulin alpha 1b
TUBA1C
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Human
tubulin alpha 1c
TUBA3E
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Human
tubulin alpha 3e
TUBA4A
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Human
tubulin alpha 4a
TUBA4B
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Human
tubulin alpha 4b
TUBA8
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Human
tubulin alpha 8
TUBB
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Human
tubulin beta class I
TUBB1
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Human
tubulin beta 1 class VI
TUBB2A
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Human
tubulin beta 2A class IIa
TUBB2B
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Human
tubulin beta 2B class IIb
TUBB3
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Human
tubulin beta 3 class III
TUBB4A
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Human
tubulin beta 4A class IVa
TUBB4B
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Human
tubulin beta 4B class IVb
TUBB6
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Human
tubulin beta 6 class V
TUBB8
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Human
tubulin beta 8 class VIII
TUBD1
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Human
tubulin delta 1
TUBE1
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Human
tubulin epsilon 1
TUBG1
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Human
tubulin gamma 1
TUBG2
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Human
tubulin gamma 2
VAMP2
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Human
vesicle associated membrane protein 2
VAMP3
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Human
vesicle associated membrane protein 3
VPS11
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Human
VPS11 core subunit of CORVET and HOPS complexes
VPS16
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Human
VPS16 core subunit of CORVET and HOPS complexes
VPS18
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Human
VPS18 core subunit of CORVET and HOPS complexes
VPS33A
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Human
VPS33A core subunit of CORVET and HOPS complexes
VPS33B
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Human
VPS33B late endosome and lysosome associated
VPS39
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Human
VPS39 subunit of HOPS complex
VPS41
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Human
VPS41 subunit of HOPS complex
VTI1A
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Human
vesicle transport through interaction with t-SNAREs 1A
VTI1B
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Human
vesicle transport through interaction with t-SNAREs 1B
YKT6
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Human
YKT6 v-SNARE homolog
ZBTB12
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Human
zinc finger and BTB domain containing 12

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