Assay name
HS_SETDB1_1339487 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SETDB1
Assay targets 14 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay targets 14 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Gene symbol
SETDB1
Gene aliases
KG1T;KIAA0067;ESET;KMT1E;TDRD21
Species
Homo sapiens
Main target
ENST00000463774
Exons numbers
1
Ensembl exons ids
ENSE00001848214
Amplicon start
235
Amplicon length
76
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000271640
Protein coding
CCDS44217
NM_001366417;NM_001366418;NM_001145415
Chr.1: 150926339 - 150964735
ENST00000368962
Protein coding
CCDS58026
NM_001243491
Chr.1: 150926349 - 150945320
ENST00000368963
Protein coding
Chr.1: 150926424 - 150945110
ENST00000368964
Nonsense mediated decay
Chr.1: 150926487 - 150941418
ENST00000368969
Protein coding
CCDS972
NM_012432
Chr.1: 150926412 - 150964744
ENST00000423081
Protein coding
Chr.1: 150926640 - 150930116
ENST00000448029
Protein coding
Chr.1: 150926345 - 150941351
ENST00000459773
Processed transcript
Chr.1: 150926424 - 150960890
ENST00000463774
Retained intron
Chr.1: 150926305 - 150928229
ENST00000481219
Retained intron
Chr.1: 150927842 - 150930456
ENST00000487584
Processed transcript
Chr.1: 150926263 - 150941377
ENST00000498193
Protein coding
Chr.1: 150926481 - 150963851
ENST00000525956
Protein coding
Chr.1: 150926263 - 150941371
ENST00000534805
Protein coding
Chr.1: 150926395 - 150950783