Assay name
HS_ESR1_1369167 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR and dPCR wet-lab validated
Assay specification
Best coverage assay for ESR1
Best transcript assay for ENST00000206249
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Best transcript assay for ENST00000206249
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Gene symbol
ESR1
Gene aliases
NR3A1;Era;ER-alpha;ESR
Species
Homo sapiens
Main target
ENST00000206249
Exons numbers
2-3
Ensembl exons ids
ENSE00003705805;ENSE00003721187
Amplicon start
940
Amplicon length
90
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000206249
Protein coding
CCDS5234
NM_001291230;NM_001122741;NM_001291241;NM_000125
Chr.6: 151807551 - 152103274
ENST00000338799
Protein coding
CCDS5234
Chr.6: 151804431 - 152099053
ENST00000427531
Protein coding
CCDS87457
NM_001328100
Chr.6: 151809107 - 152129619
ENST00000440973
Protein coding
CCDS5234
NM_001122742
Chr.6: 151690496 - 152103274
ENST00000443427
Protein coding
CCDS5234
NM_001122740
Chr.6: 151807319 - 152103274