Assay name
HS_ATG7_2474585 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for ATG7
Best transcript assay for ENST00000354956
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000354956
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
ATG7
Gene aliases
GSA7;DKFZp434N0735;APG7L
Species
Homo sapiens
Main target
ENST00000354956
Exons numbers
11-12
Ensembl exons ids
ENSE00003490994;ENSE00003530161
Amplicon start
1082
Amplicon length
105
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000354449
Protein coding
CCDS2605
NM_001349238;NM_001349232;NM_001349233;NM_001349235;NM_001349234;NM_006395;NM_001349237;NM_001349236
Chr.3: 11272416 - 11557665
ENST00000354956
Protein coding
CCDS46752
NM_001136031
Chr.3: 11272416 - 11555083
ENST00000424071
Nonsense mediated decay
Chr.3: 11309009 - 11358610
ENST00000446450
Protein coding
CCDS46753
NM_001144912
Chr.3: 11272416 - 11554988
ENST00000460291
Retained intron
Chr.3: 11342200 - 11348747
ENST00000478638
Processed transcript
Chr.3: 11331402 - 11347971