Assay name
HS_DEPDC1B_1426053 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for DEPDC1B
Best transcript assay for ENST00000453022
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Best transcript assay for ENST00000453022
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
DEPDC1B
Gene aliases
XTP1;BRCC3
Species
Homo sapiens
Main target
ENST00000453022
Exons numbers
3-4
Ensembl exons ids
ENSE00003628275;ENSE00003480562
Amplicon start
449
Amplicon length
87
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000265036
Protein coding
CCDS3977
NM_018369
Chr.5: 60596912 - 60700166
ENST00000453022
Protein coding
CCDS47214
NM_001145208
Chr.5: 60597629 - 60700134
ENST00000505017
Retained intron
Chr.5: 60645516 - 60648147
ENST00000512078
Nonsense mediated decay
Chr.5: 60597668 - 60700134