Assay name
HS_CHD2_1653169 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for CHD2
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
CHD2
Gene aliases
FLJ38614;DKFZp547I1315;DKFZp781D1727;DKFZp686E01200
Species
Homo sapiens
Main target
ENST00000637572
Exons numbers
8-10
Ensembl exons ids
ENSE00003796463;ENSE00003800043;ENSE00003796094
Amplicon start
1118
Amplicon length
73
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000394196
Protein coding
CCDS10374
NM_001271
Chr.15: 92900324 - 93027996
ENST00000420239
Protein coding
CCDS45356
NM_001042572
Chr.15: 92900335 - 92949234
ENST00000626782
Protein coding
Chr.15: 92904473 - 92949231
ENST00000626874
Protein coding
Chr.15: 92900189 - 93022162
ENST00000628375
Protein coding
Chr.15: 92900324 - 92947577
ENST00000635856
Processed transcript
Chr.15: 92900324 - 92993235
ENST00000636881
Nonsense mediated decay
Chr.15: 92939656 - 93000635
ENST00000637572
Retained intron
Chr.15: 92924278 - 92997069
ENST00000637613
Protein coding
Chr.15: 92939654 - 92949228