Assay name
HS_IFI16_1679041 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for IFI16
Best transcript assay for ENST00000368131
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000368131
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
IFI16
Gene aliases
IFNGIP1;PYHIN2
Species
Homo sapiens
Main target
ENST00000368131
Exons numbers
10-11
Ensembl exons ids
ENSE00003472774;ENSE00001877836
Amplicon start
2292
Amplicon length
125
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000295809
Protein coding
Chr.1: 159009927 - 159055155
ENST00000340979
Protein coding
Chr.1: 159009892 - 159055153
ENST00000359709
Protein coding
CCDS58039
NM_001206567
Chr.1: 159010010 - 159055148
ENST00000368131
Protein coding
CCDS1180
NM_005531
Chr.1: 159009892 - 159055155
ENST00000368132
Protein coding
Chr.1: 159009918 - 159055151
ENST00000448393
Protein coding
Chr.1: 159014681 - 159055124
ENST00000483916
Retained intron
Chr.1: 159009918 - 159055151
ENST00000493884
Retained intron
Chr.1: 159009918 - 159055151
ENST00000562225
Retained intron
Chr.1: 159032504 - 159055128