Assay name
MM_RBM39_2057341 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Rbm39
Best transcript assay for ENSMUST00000155837
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Best transcript assay for ENSMUST00000155837
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Rbm39
Species
Mus musculus
Main target
ENSMUST00000155837
Exons numbers
4-5
Ensembl exons ids
ENSMUSE00001273155;ENSMUSE00001261132
Amplicon start
428
Amplicon length
84
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000029149
Protein coding
CCDS71168
NM_001291114
Chr.2: 156147249 - 156180167
ENSMUST00000109587
Protein coding
CCDS16964
NM_001362764;NM_001362763;NM_133242
Chr.2: 156147239 - 156180238
ENSMUST00000126992
Protein coding
Chr.2: 156161829 - 156180142
ENSMUST00000137297
Retained intron
Chr.2: 156172954 - 156177901
ENSMUST00000138381
Retained intron
Chr.2: 156167538 - 156177731
ENSMUST00000142071
Nonsense mediated decay
Chr.2: 156147249 - 156180149
ENSMUST00000146288
Protein coding
Chr.2: 156164806 - 156180159
ENSMUST00000146297
Protein coding
CCDS71168
NM_001291115
Chr.2: 156147246 - 156179580
ENSMUST00000146549
Nonsense mediated decay
Chr.2: 156172833 - 156180161
ENSMUST00000147098
Nonsense mediated decay
Chr.2: 156172932 - 156180147
ENSMUST00000153514
Nonsense mediated decay
Chr.2: 156147940 - 156180184
ENSMUST00000155837
Nonsense mediated decay
Chr.2: 156147940 - 156180176