Assay name
HS_BDNF_1249818 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for BDNF
Assay targets 19 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 19 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
BDNF
Species
Homo sapiens
Main target
ENST00000525528
Amplicon start
4249
Amplicon length
106
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000314915
Protein coding
CCDS7865
NM_170731
Chr.11: 27654893 - 27722058
ENST00000356660
Protein coding
CCDS7866
NM_001709
Chr.11: 27654893 - 27700455
ENST00000395978
Protein coding
CCDS7866
NM_001143806
Chr.11: 27654893 - 27720723
ENST00000395980
Protein coding
CCDS7866
NM_170733
Chr.11: 27654893 - 27701633
ENST00000395981
Protein coding
CCDS7866
NM_170732
Chr.11: 27654893 - 27720723
ENST00000395983
Protein coding
CCDS7866
NM_001143808;NM_001143809
Chr.11: 27654893 - 27701053
ENST00000395986
Protein coding
CCDS41628
NM_170734
Chr.11: 27654893 - 27699667
ENST00000418212
Protein coding
CCDS7866
NM_001143814
Chr.11: 27654893 - 27700488
ENST00000420794
Protein coding
CCDS7866
NM_001143811
Chr.11: 27654893 - 27701053
ENST00000438929
Protein coding
CCDS44558
NM_001143810
Chr.11: 27654893 - 27701053
ENST00000439476
Protein coding
CCDS7866
NM_001143816
Chr.11: 27654893 - 27659658
ENST00000525528
Protein coding
CCDS7866
NM_170735
Chr.11: 27654893 - 27659658
ENST00000525950
Protein coding
CCDS7866
NM_001143805
Chr.11: 27654893 - 27720779
ENST00000530786
Nonsense mediated decay
Chr.11: 27654893 - 27701053
ENST00000530861
Protein coding
CCDS7866
NM_001143812
Chr.11: 27654893 - 27700900
ENST00000532997
Protein coding
CCDS7866
NM_001143807
Chr.11: 27654893 - 27719747
ENST00000533131
Protein coding
CCDS7866
Chr.11: 27654893 - 27699667
ENST00000533246
Protein coding
CCDS7866
NM_001143813
Chr.11: 27654893 - 27700488
ENST00000584049
Processed transcript
Chr.11: 27654893 - 27701633