Assay name
HS_HDAC8_1603756 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for HDAC8
Assay targets 46 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay targets 46 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Gene symbol
HDAC8
Gene aliases
RPD3;KDAC8;HDACL1;WTS;MRXS6
Species
Homo sapiens
Main target
ENST00000648298
Exons numbers
1-2
Ensembl exons ids
ENSE00003832179;ENSE00003677170
Amplicon start
151
Amplicon length
87
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000373554
Protein coding
CCDS55450
NM_001166420
Chr.X: 72567582 - 72572853
ENST00000373556
Protein coding
CCDS55452
NM_001166422
Chr.X: 72567582 - 72572856
ENST00000373559
Protein coding
CCDS55448
NM_001166448
Chr.X: 72474535 - 72572812
ENST00000373560
Protein coding
Chr.X: 72474407 - 72572830
ENST00000373568
Protein coding
Chr.X: 72351300 - 72572842
ENST00000373571
Protein coding
Chr.X: 72466696 - 72572843
ENST00000373573
Protein coding
CCDS14420
NM_018486
Chr.X: 72329516 - 72572843
ENST00000373583
Protein coding
Chr.X: 72329516 - 72572877
ENST00000373589
Protein coding
CCDS55449
NM_001166418
Chr.X: 72329560 - 72573101
ENST00000412342
Nonsense mediated decay
Chr.X: 72464668 - 72572778
ENST00000415409
Protein coding
Chr.X: 72385109 - 72572843
ENST00000436675
Nonsense mediated decay
Chr.X: 72351791 - 72572858
ENST00000439122
Protein coding
CCDS55451
NM_001166419
Chr.X: 72473416 - 72573083
ENST00000444609
Processed transcript
Chr.X: 72568755 - 72573079
ENST00000478743
Processed transcript
Chr.X: 72421655 - 72572847
ENST00000486704
Retained intron
Chr.X: 72571946 - 72572816
ENST00000647594
Protein coding
Chr.X: 72329568 - 72572865
ENST00000647641
Processed transcript
Chr.X: 72333656 - 72572848
ENST00000647654
Protein coding
Chr.X: 72329559 - 72572843
ENST00000647718
Retained intron
Chr.X: 72460155 - 72572816
ENST00000647859
Protein coding
Chr.X: 72329568 - 72572843
ENST00000647886
Protein coding
Chr.X: 72329557 - 72572859
ENST00000647980
Protein coding
Chr.X: 72329568 - 72572847
ENST00000648036
Protein coding
Chr.X: 72473431 - 72572810
ENST00000648139
Protein coding
Chr.X: 72351379 - 72572816
ENST00000648285
Retained intron
Chr.X: 72464029 - 72572817
ENST00000648298
Protein coding
Chr.X: 72457402 - 72572843
ENST00000648452
Protein coding
Chr.X: 72329538 - 72572865
ENST00000648504
Nonsense mediated decay
Chr.X: 72329559 - 72572698
ENST00000648577
Nonsense mediated decay
Chr.X: 72484851 - 72572816
ENST00000648834
Nonsense mediated decay
Chr.X: 72351421 - 72572818
ENST00000648870
Protein coding
Chr.X: 72457406 - 72572856
ENST00000648939
Nonsense mediated decay
Chr.X: 72329559 - 72572787
ENST00000648962
Protein coding
Chr.X: 72473416 - 72572821
ENST00000649097
Nonsense mediated decay
Chr.X: 72329538 - 72572816
ENST00000649116
Nonsense mediated decay
Chr.X: 72457416 - 72572843
ENST00000649181
Nonsense mediated decay
Chr.X: 72329618 - 72572781
ENST00000649242
Nonsense mediated decay
Chr.X: 72460259 - 72572816
ENST00000649274
Nonsense mediated decay
Chr.X: 72329725 - 72572704
ENST00000649518
Nonsense mediated decay
Chr.X: 72460342 - 72572866
ENST00000649543
Nonsense mediated decay
Chr.X: 72351144 - 72572816
ENST00000649752
Protein coding
Chr.X: 72457621 - 72572843
ENST00000650126
Protein coding
Chr.X: 72473431 - 72572847
ENST00000650471
Nonsense mediated decay
Chr.X: 72329805 - 72572843
ENST00000650604
Protein coding
Chr.X: 72329568 - 72573081
ENST00000650636
Protein coding
Chr.X: 72562220 - 72572816