Assay name
HS_BRCA2_2474639 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for BRCA2
Best transcript assay for ENST00000380152
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000380152
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
BRCA2
Gene aliases
FAD;FAD1;BRCC2;XRCC11;FANCD1;FACD;FANCD
Species
Homo sapiens
Main target
ENST00000380152
Exons numbers
26-27
Ensembl exons ids
ENSE00003560258;ENSE00003717596
Amplicon start
9870
Amplicon length
92
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000380152
Protein coding
CCDS9344
Chr.13: 32315474 - 32400266
ENST00000470094
Nonsense mediated decay
Chr.13: 32379840 - 32398272
ENST00000533776
Retained intron
Chr.13: 32396809 - 32398448
ENST00000544455
Protein coding
CCDS9344
NM_000059
Chr.13: 32315480 - 32399668