Assay name
HS_CDH1_2474693 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR and dPCR wet-lab validated
Assay specification
Best coverage assay for CDH1
Best transcript assay for ENST00000261769
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Best transcript assay for ENST00000261769
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Gene symbol
CDH1
Gene aliases
uvomorulin;CD324;UVO
Species
Homo sapiens
Main target
ENST00000261769
Exons numbers
12-13
Ensembl exons ids
ENSE00003463070;ENSE00003480911
Amplicon start
2036
Amplicon length
94
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000261769
Protein coding
CCDS10869
NM_004360
Chr.16: 68737292 - 68835537
ENST00000422392
Protein coding
CCDS82005
NM_001317185;NM_001317186;NM_001317184
Chr.16: 68737352 - 68833536
ENST00000562836
Processed transcript
Chr.16: 68763294 - 68833538
ENST00000566510
Nonsense mediated decay
Chr.16: 68737352 - 68833536
ENST00000566612
Nonsense mediated decay
Chr.16: 68737312 - 68835030
ENST00000611625
Protein coding
Chr.16: 68737292 - 68835541