BDNF

BDNF Gene Summary

This gene encodes a member of the nerve growth factor family of proteins. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed to generate the mature protein. Binding of this protein to its cognate receptor promotes neuronal survival in the adult brain. Expression of this gene is reduced in Alzheimer's, Parkinson's, and Huntington's disease patients. This gene may play a role in the regulation of the stress response and in the biology of mood disorders. [provided by RefSeq, Nov 2015]

Details

Type
Protein Coding
Official Symbol
BDNF
Official Name
brain derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:1033]
Ensembl ID
ENSG00000176697
Bio databases IDs NCBI: 627 Ensembl: ENSG00000176697
Aliases brain derived neurotrophic factor, neurotrophin
Synonyms
ANON2,Brain derived neurotrophic factor,BULN2,OCD1,tBDNF
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • protein binding
  • loop domain
  • pro domain
  • neurotrophin TRKB receptor binding
  • growth factor
  • Nerve growth factor family

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • CYTH1
  • NGF
  • NTF3
  • NTF4
  • BDNF
  • WDCP
  • CTNNB1
  • HAP1
  • NGFR
  • GAL
disease
  • diarrhea
  • plasma cell myeloma
  • neoplasia
  • weight loss
  • liver cancer
  • cancer
  • epithelial cancer
  • neurodegeneration
  • obesity
  • metabolic syndrome X
regulated by
  • cyclosporin A
  • midazolam
  • tetrachlorodibenzodioxin
  • lovastatin
  • fingolimod
  • Ca2+
  • PTEN
  • FSH
  • dopamine
  • D-mannose
regulates
  • CASP3
  • GCG
  • Ca2+
  • NOS2
  • JNK
  • IL1B
  • IL6
  • TNF
  • ERK
  • AKT
role in cell
  • growth
  • cell viability
  • synthesis in
  • killing
  • activation in
  • formation
  • formation in
  • expression in
  • apoptosis
  • maturation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • glutaminergic synapse
  • en passant terminal
  • Cytoplasm
  • cell surface
  • intracellular space
  • somatodendritic region
  • perinuclear region
  • Nucleus
  • vesicles
  • Golgi Apparatus
  • granules
  • endoplasmic reticulum lumen
  • mitochondrial inner membrane
  • perinuclear space
  • alpha granules
  • dendritic spine head
  • synaptic vesicles
  • neurites
  • nerve ending
  • dendrite initial segments
  • synaptosomes
  • synapse
  • dense-core vesicles
  • cytoplasmic vesicles
  • secretory vesicles
  • secretory granules
  • membrane processes
  • perikaryon
  • axons
  • dendrites
  • postsynaptic density
  • axon terminals
  • mossy fiber boutons
  • presynaptic terminals
  • axon branches
  • clathrin-coated vesicles
  • cis Golgi cisternae
  • mossy fibers
  • apical processes
  • vesicle fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the BDNF gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • positive regulation of receptor binding
  • nervous system development
  • neuron projection morphogenesis
  • transmembrane receptor protein tyrosine kinase signaling pathway
  • axon guidance
  • collateral sprouting
  • negative regulation of neuron apoptotic process
  • nerve development
  • positive regulation of collateral sprouting
  • synapse assembly
  • brain-derived neurotrophic factor receptor signaling pathway
  • regulation of protein localization at cell surface
  • regulation of synaptic transmission
  • positive regulation of brain-derived neurotrophic factor receptor signaling pathway
  • positive regulation of neuron projection development
  • negative regulation of myotube differentiation
  • positive regulation of synapse assembly
  • negative regulation of apoptotic signaling pathway
  • positive regulation of peptidyl-serine phosphorylation

CELLULAR COMPONENT

Where in the cell the gene product is active
  • dendrite
  • endoplasmic reticulum lumen
  • extracellular space
  • perinuclear region of cytoplasm
  • cytoplasm
  • synaptic vesicle
  • extracellular region
  • axon

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • growth factor activity
  • protein binding
  • nerve growth factor receptor binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.