Assay name​
HS_CADM1_1266337 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for CADM1
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
CADM1
Gene aliases​
NECL2;ST17;BL2;SYNCAM;IGSF4A;Necl-2;SYNCAM1;RA175;TSLC1;IGSF4
Species​
Homo sapiens
Main target​
ENST00000537058
Exons numbers​
2-3
Ensembl exons ids​
ENSE00003483862;ENSE00003673261
Amplicon start​
233
Amplicon length​
120
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000331581
Protein coding
CCDS73399
NM_001301043
Chr.11: 115176295 - 115504565
ENST00000452722
Protein coding
CCDS8373
NM_014333
Chr.11: 115169236 - 115504415
ENST00000536727
Protein coding
CCDS73397
NM_001301045
Chr.11: 115174307 - 115504415
ENST00000537058
Protein coding
CCDS73398
NM_001301044
Chr.11: 115174307 - 115504415
ENST00000537140
Processed transcript
Chr.11: 115169236 - 115504523
ENST00000540951
Nonsense mediated decay
Chr.11: 115231440 - 115504415
ENST00000541434
Retained intron
Chr.11: 115214490 - 115504394
ENST00000542447
Protein coding
CCDS53711
NM_001098517
Chr.11: 115173625 - 115504523
ENST00000542450
Protein coding
Chr.11: 115217940 - 115240980
ENST00000543249
Protein coding
Chr.11: 115229220 - 115504957
ENST00000543540
Protein coding
Chr.11: 115229156 - 115287477
ENST00000545094
Protein coding
Chr.11: 115229189 - 115256891
ENST00000545380
Protein coding
Chr.11: 115175341 - 115504389
ENST00000612235
Protein coding
Chr.11: 115169589 - 115240422
ENST00000616271
Protein coding
Chr.11: 115176467 - 115240421